STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pycPyc: pyruvate carboxylase. (1227 aa)    
Predicted Functional Partners:
birA
BirA: predicted biotin--acteyl-CiA-carboxylase ligase.
 
 
 0.974
pccB
PccB: propionyl-CoA carboxylase, beta subunit.
 
 0.968
pycB
PycB: pyruvate carboxylase, subunit B.
 
 
0.961
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
    
 0.954
pyk
Pyk: pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.950
gltA
GltA: citrate synthase; Belongs to the citrate synthase family.
  
 0.940
gltA2
GltA2: citrate synthase, type II; Belongs to the citrate synthase family.
  
 0.940
mdh
Mdh: malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.935
mdh2
Mdh2: malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.935
pckG
PckG: phosphoenolpyruvate carboxykinase.
   
 
 0.932
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.