Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78490.1Uncharacterized protein; ATP-grasp fold. (421 aa)    
Predicted Functional Partners:
pycB
PycB: pyruvate carboxylase, subunit B.
  
 
 0.994
lysA2
LysA2: diaminopimelate decarboxylase (DAP decarboxylase).
 
   
 0.949
CCK81789.1
Predicted polyketide synthase.
 
  
 0.928
ribD
RibD: riboflavin synthesis protein D; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.873
CCK78492.1
Uncharacterized protein related to S-adenosylmethionine decarboxylase.
 
    0.838
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.821
CCK78491.1
Conserved uncharacterized protein related to acyl-CoA acyltranserases.
       0.813
CCK79631.1
Conserved uncharacterized protein.
  
     0.728
CCK80650.1
Putative multi-domain beta-ketoacyl polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.723
CCK81748.1
Tetratricopeptide repeat protein.
 
    0.691
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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