STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK78492.1Uncharacterized protein related to S-adenosylmethionine decarboxylase. (129 aa)    
Predicted Functional Partners:
lysA2
LysA2: diaminopimelate decarboxylase (DAP decarboxylase).
 
   
 0.853
CCK78490.1
Uncharacterized protein; ATP-grasp fold.
 
    0.840
CCK78491.1
Conserved uncharacterized protein related to acyl-CoA acyltranserases.
       0.796
speE2
SpeE2: spermidine synthase (putrescine aminopropyltransferase); Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
  
 0.721
CCK81107.1
Conserved uncharacterized protein.
  
  
 0.721
CCK79067.1
Two component system sensor histidine kinase.
  
     0.657
CCK79069.1
Two component system response regulator.
  
  
 0.550
fliN
FliN: flagellar motor switch protein.
   
    0.543
CCK78483.1
Conserved uncharacterized protein.
 
     0.498
CCK80417.1
Putative peptidoglycan-binding protein, related to LysM.
  
    0.446
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.