Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78588.1Putative protein-tyrosine phosphatase, dual specificity. (335 aa)    
Predicted Functional Partners:
ppsA2
PpsA2: phosphoenolpyruvate synthase/pyruvate phosphate dikinase (PEP synthase).
 
     0.855
phnD
PhnD: phosphonate ABC transporter, periplasmic phosphonate-binding protein; Signal peptide.
 
   
 0.812
CCK78498.1
Conserved uncharacterized protein.
   
 0.803
CCK79416.1
Uncharacterized protein, kinase-like domain.
   
 0.803
CCK78589.1
Putative two component response regulator.
 
   
 0.774
CCK78590.1
Two component system hybrid sensor protein.
  
     0.760
CCK80691.1
WD-40 repeat domain protein.
  
 0.709
CCK80692.1
WD-40 repeat domain protein.
  
 0.709
tmcD
TmcD: predicted Tmc redox complex, uncharacterized protein.
   
 0.704
CCK80596.1
Predicted methyl-accepting chemotyis protein.
   
 0.704
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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