Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78672.1Sugar dehydratase, associated with anaerobic toluene degradation. (310 aa)    
Predicted Functional Partners:
CCK78671.1
Conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
 
 
 0.905
bssG2
BssG2: conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
 
     0.873
CCK78674.1
AMP-dependent synthetase and ligase.
  
 
 0.813
rpsS
RpsS: 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.683
rpsC
RpsC: 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.663
CCK78670.1
Conserved uncharacterized protein associated with anaerobic toluene degradation gene cluster.
       0.658
rpsZ
RpsZ: 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
   
 0.649
rpsQ
RpsQ: 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
 0.648
rpsE
RpsE: 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
 0.641
rplD
RplD: 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
   
 0.635
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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