Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK78687.1Two component system sensor protein. (513 aa)    
Predicted Functional Partners:
CCK81315.1
Predicted CBS domian and cyclic nucleotide-regulated nucleotidyltransferase.
 
     0.909
CCK78688.1
Two component system response regulator, sigma54-specific.
 
 
 0.867
CCK79788.1
Methyl-accepting chemotaxis sensory transducer protein; Signal peptide.
 
 
    0.850
CCK81931.1
Methyl-accepting chemotaxis sensory transducer protein.
 
 
  
 0.832
CCK78175.1
Putative methyl-accepting chemotaxis sensory transducer; Signal peptide.
 
 
  
 0.820
CCK78276.1
Predicted sensor histidine kinase.
 
 
 0.813
CCK78444.1
Predicted methyl-accepting chemotaxis sensory transducer.
 
 
  
 0.797
CCK82026.1
Methyl-accepting chemotaxis sensory transducer protein.
 
 
  
 0.791
CCK79079.1
Methyl-accepting chemotaxis sensory transducer; Signal peptide.
 
 
  
 0.787
CCK78641.1
Methyl-accepting chemotaxis protein.
 
 
  
 0.783
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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