Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK78739.1Uncharacterized protein, CheY-like receiver domain. (194 aa)    
Predicted Functional Partners:
pilT2
PilT2: twitching motility protein.
 
   
 0.912
CCK79042.1
Two component system sensor histidine kinase, barA-like.
  
 
 0.844
pilT
PilT: twitching motility protein.
 
   
 0.759
CCK81416.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.753
CCK78447.1
Sensory box histidine kinase/response regulator protein.
  
 
 0.751
CCK78832.1
Two component system sensor kinase, hybrid.
  
 
 0.711
CCK80280.1
Conserved uncharacterized protein.
  
     0.666
CCK82265.1
Conserved uncharacterized protein.
  
     0.659
CCK78775.1
Conserved uncharacterized protein; Signal peptide.
  
     0.658
CCK79139.1
MCP methyltransferase/methylesterase, CheR/CheB-like with PAS/PAC sensor domain.
  
 
 0.645
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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