Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK78742.1Conserved uncharacterized protein. (394 aa)    
Predicted Functional Partners:
CCK78740.1
Conserved uncharacterized protein.
       0.608
pbpA
PbpA: penicillin-binding protein 1A; Signal peptide.
       0.608
folC
FolC: folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
  
  
 0.536
pilT2
PilT2: twitching motility protein.
       0.482
CCK78739.1
Uncharacterized protein, CheY-like receiver domain.
       0.478
CCK78259.1
Predicted RNA polymerase sigma factor, related to sigma70; Belongs to the sigma-70 factor family.
  
 
 0.428
fliA
FliA: RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.428
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.423
rlpA
RlpA: rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
     
 0.413
pilT
PilT: twitching motility protein.
       0.406
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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