Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78744.1Conserved uncharacterized protein, UPF0153. (116 aa)    
Predicted Functional Partners:
CCK79502.1
Conserved uncharacterized protein, UPF0153.
  
     0.767
dus
Dus: tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.751
feoB
FeoB: ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.542
fur
Fur: ferric uptake regulator.
       0.541
CCK78748.1
Conserved uncharacterized protein; Signal peptide.
       0.483
fliD
FliD: predicted flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
    0.482
CCK80687.1
Uncharacterized protein; Signal peptide.
   
   0.422
flgD
FlgD: predicted flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.422
CCK81155.1
Predicted peptidase M48, Ste24p.
 
     0.420
CCK81670.1
Tetratricopeptide repeat domain protein, DUF115.
 
    0.420
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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