Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcmPcm: protein-L-isoaspartate O-methyltransferase (protein-beta-aspartate methyltransferase); Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (218 aa)    
Predicted Functional Partners:
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
  
 
 0.842
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
  
 
 0.842
CCK78201.1
Conserved uncharacterized protein related to NAD-dependent epimerase/dehydratase.
   
 
 0.835
surE
SurE: 5?-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
  
 0.814
CCK78765.1
Uncharacterized protein, DUF368.
 
     0.792
mrpA
MrpA: Na(+)/H(+) antiporter, subunit A (Multiple resistance and pH homeostasis protein A).
  
 
 0.711
CCK80052.1
Putative cyctchrome c, class III family protein; Signal anchor.
   
 
 0.696
ispE
IspE: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK); Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
   
    0.692
ctaD
CtaD: cytochrome c oxidase, subunit I.
    
   0.661
ctaE
CtaE: cytochrome c oxidase, subunit III; Signal anchor.
    
   0.661
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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