Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK78775.1Conserved uncharacterized protein; Signal peptide. (195 aa)    
Predicted Functional Partners:
CCK78774.1
Two component system sensor histidine kinase.
 
     0.836
lpxC
LpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
       0.808
CCK80270.1
Conserved uncharacterized protein.
  
     0.706
CCK78773.1
Two component transcriptional regulator, sigma54-specific.
       0.670
CCK78739.1
Uncharacterized protein, CheY-like receiver domain.
  
     0.658
CCK78772.1
Conserved uncharacterized protein, putative methylase.
       0.649
CCK81542.1
Conserved uncharacterized protein; Signal peptide.
  
     0.627
CCK80642.1
Amylo-alpha-1,6-glucosidase.
  
     0.594
coaD
CoaD: phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.575
CCK79278.1
Two component system response regulator.
  
     0.565
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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