Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78796.1Mg chelatase, fragment. (152 aa)    
Predicted Functional Partners:
dprA
DprA: DNA protecting protein A.
 
 
 0.854
CCK79784.1
Phosphoribosyl transferase.
 
  
 0.822
CCK81514.1
Conserved uncharacterized protein, UPF0102; Belongs to the UPF0102 family.
 
  
 0.729
comE
ComE: DNA internalization-related competence protein.
 
  
 0.709
CCK78797.1
Uncharacterized protein.
       0.661
blc2
Blc2: outer membrane transporter, lipocalin family; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
       0.592
CCK78795.1
Uncharacterized protein.
       0.555
flgF
FlgF: flagellar basal-body rod protein.
   
   0.458
ruvC
RuvC: crossover junction endodeoxyribonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
   
 0.420
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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