STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhdHYhdH: quinone oxidoreuctase. (337 aa)    
Predicted Functional Partners:
ydhH
YdhH: predicted quinone oxidoreductase.
  
  
 
0.913
acsA
AcsA: acetyl-coenzyme A synthetase (acetate--CoA ligase); Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.909
acsA4
AcsA4: acetyl-coenzyme A synthetase (acetate--CoA ligase).
   
 
 0.909
prpE
PrpE: propionate-CoA ligase.
   
 
 0.909
padG1
PadG1: phenylglyoxylate:acceptor oxidoreductase, subunit G.
     
 0.900
padE1
PadE1: phenylglyoxylate:acceptor oxidoreductase, subunit E.
     
 0.900
CCK79353.1
CoA-binding domain protein.
     
  0.900
CCK79819.1
Predicted acyl-CoA synthetase.
     
  0.900
CCK79890.1
Putative acetyl-CoA synthetase.
     
  0.900
yhdH2
YhdH2: quinone oxidoreductase.
  
  
 
0.900
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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