Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK78850.1Uncharacterized response regulator receiver domain protein combined with universal stress protein domain. (300 aa)    
Predicted Functional Partners:
CCK78858.1
Two component system sensor histidine kinase, PAS domains.
 
   
 0.782
CCK80996.1
Two component system sensor histidine kinase.
  
  
 0.737
CCK80592.1
Two component system sensor histidine kinase.
  
   
 0.724
livF2
LivF2: high-affinity branched-chain amino acid transport ATP-binding protein.
     
 0.720
CCK82398.1
Conserved uncharacterized protein.
 
     0.674
CCK81772.1
Two component system sensor histidine kinase, PAS + GAF domain.
  
   
 0.662
livJ2
LivJ2: ABC-transporter Leu/Ile/Val/Thre/Ala-binding protein; Signal peptide.
 
   
 0.649
CCK80555.1
Putative sensor protein.
  
     0.550
CCK81942.1
Xylose isormerase domain protein, TIM barrel.
  
    0.532
CCK80556.1
Two component system sensor histidine kinase.
  
   
 0.524
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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