Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78866.1Putative transcriptional regulator, XRE family. (181 aa)    
Predicted Functional Partners:
CCK82282.1
Transcriptional regulator, GntR family.
 
  
 0.685
fadE
FadE: acyl-CoA dehydrogenase.
  
  
 0.619
CCK81789.1
Predicted polyketide synthase.
   
 
 0.603
ilvE
IlvE: branched-chain amino acid aminotransferase.
 
     0.575
guaA
GuaA: GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.529
CCK78819.1
Conserved uncharacterized protein.
  
    0.470
npdA
NpdA: NAD-dependent deacetylase, regulatory protein SIR2 homolog.
  
    0.470
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
  
 0.462
CCK81829.1
Amino acid adenylation domain protein.
     
 0.459
CCK81452.1
Transcriptional regulator, AraC family.
 
 
 0.453
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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