STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK78892.1Putative permease; Signal anchor. (412 aa)    
Predicted Functional Partners:
CCK78890.1
Uncharacterized ABC transporter, ATP-binding protein.
 
 
 0.971
CCK78893.1
Conserved uncharacterized protein; Signal peptide.
 
 
 
 0.971
CCK78889.1
Conserved uncharacterized protein; Signal peptide.
 
    0.894
lolD
LolD: lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.835
CCK82188.1
Predicted ABC transporter, ATP-binding protein.
 
 
 0.828
CCK82127.1
ABC transporter, ATP-binding protein.
 
 
 0.808
CCK78217.1
ABC-type transport system, ATP-binding protein.
  
 
 0.780
CCK80824.1
ABC transporter, ATP-binding protein.
  
 
 0.780
CCK78891.1
Putative efflux ABC transporter, permease protein; Signal anchor.
 
    
0.756
lolA
LolA: predicted outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.751
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.