Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| flaG | fliG | TOL2_C35480 | TOL2_C35850 | FlaG: predicted flagellar protein G. | FliG: flagellar motor switch protein. | 0.587 |
| flaG | hypE | TOL2_C35480 | TOL2_C07310 | FlaG: predicted flagellar protein G. | HypE: hydrogenase expression/formation protein. | 0.653 |
| fliG | flaG | TOL2_C35850 | TOL2_C35480 | FliG: flagellar motor switch protein. | FlaG: predicted flagellar protein G. | 0.587 |
| fliG | hypE | TOL2_C35850 | TOL2_C07310 | FliG: flagellar motor switch protein. | HypE: hydrogenase expression/formation protein. | 0.653 |
| hypA | hypB | TOL2_C33800 | TOL2_C33790 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HypB: hydrogenase assesory protein. | 0.990 |
| hypA | hypC | TOL2_C33800 | TOL2_C07280 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HypC: hydrogenase assembly chaperone. | 0.865 |
| hypA | hypD | TOL2_C33800 | TOL2_C07300 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HypD: hydrogenase formation protein; Belongs to the HypD family. | 0.887 |
| hypA | hypE | TOL2_C33800 | TOL2_C07310 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HypE: hydrogenase expression/formation protein. | 0.862 |
| hypA | hypF | TOL2_C33800 | TOL2_C07290 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HypF: hydrogenase maturation factor; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.865 |
| hypA | hysA | TOL2_C33800 | TOL2_C39200 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HysA: periplasmic [NiFeSe] hydrogenase, small subunit. | 0.724 |
| hypA | hysB | TOL2_C33800 | TOL2_C39190 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | HysB: periplasmic [NiFeSe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.954 |
| hypA | nifJ | TOL2_C33800 | TOL2_C40810 | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | NifJ: pyruvate-flavodoxin oxidoreductase. | 0.588 |
| hypB | hypA | TOL2_C33790 | TOL2_C33800 | HypB: hydrogenase assesory protein. | HypA: hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.990 |
| hypB | hypC | TOL2_C33790 | TOL2_C07280 | HypB: hydrogenase assesory protein. | HypC: hydrogenase assembly chaperone. | 0.953 |
| hypB | hypD | TOL2_C33790 | TOL2_C07300 | HypB: hydrogenase assesory protein. | HypD: hydrogenase formation protein; Belongs to the HypD family. | 0.964 |
| hypB | hypE | TOL2_C33790 | TOL2_C07310 | HypB: hydrogenase assesory protein. | HypE: hydrogenase expression/formation protein. | 0.924 |
| hypB | hypF | TOL2_C33790 | TOL2_C07290 | HypB: hydrogenase assesory protein. | HypF: hydrogenase maturation factor; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.887 |
| hypB | hysA | TOL2_C33790 | TOL2_C39200 | HypB: hydrogenase assesory protein. | HysA: periplasmic [NiFeSe] hydrogenase, small subunit. | 0.883 |
| hypB | hysB | TOL2_C33790 | TOL2_C39190 | HypB: hydrogenase assesory protein. | HysB: periplasmic [NiFeSe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. | 0.853 |
| hypB | nifJ | TOL2_C33790 | TOL2_C40810 | HypB: hydrogenase assesory protein. | NifJ: pyruvate-flavodoxin oxidoreductase. | 0.431 |
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