Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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aroFAroF: phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (345 aa)    
Predicted Functional Partners:
aroF2
AroF2: predicted phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 
 0.955
aroB
AroB: 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 
 0.953
aroF3
AroF3: phospho-2-dehydro-3-deoxyheptonate aldolase.
    
 0.917
tkt
Tkt: transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.835
talC
TalC: transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
   
 
 0.832
fbaB
FbaB: fructose-bisphosphate aldolase, class I.
    
  0.820
CCK81674.1
Transketolase, pyrimidine-binding domain protein.
    
  0.820
CCK81675.1
Transketolase, thiamine diphosphate-binding domain protein.
    
  0.820
CCK79291.1
Putative ketose-bisphosphate aldolase family protein.
     
 0.816
tyrA
TyrA: T-protein [includes: chorismate mutase; prephenate dehydrogenase].
  
  
 0.805
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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