Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK78924.1Putative transmembrane di-heme cytochrome; Signal peptide. (275 aa)    
Predicted Functional Partners:
CCK78925.1
Uncharacterized protein related to multiheme cytochrome; Signal peptide.
      0.931
CCK78926.1
Predicted cytochrome c family protein; Signal peptide.
 
     0.878
fdhA3
FdhA3: formate dehydrogenase, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.801
CCK82543.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.794
hmcB
HmcB: HMC redox complex, transmembrane protein; Signal peptide.
 
 
 0.782
CCK78214.1
Predicted 4Fe-4S ferredoxin, predicted function in phenylacetaldehyde oxidation.
  
 
 0.705
padC1
PadC1: phenylacetyl-CoA:acceptor oxidoreductase, subunit C.
  
 
 0.705
CCK78453.1
4Fe-4S ferredoxin, iron-sulfur binding protein.
  
 
 0.705
phsB
PhsB: putative thiosulfate reductase electron transport protein.
  
 
 0.705
CCK78594.1
4Fe-4S ferredoxin.
  
 
 0.705
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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