Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arnBArnB: predicted UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (403 aa)    
Predicted Functional Partners:
CCK78975.1
Putative sugar transferase; Signal anchor.
  
 0.947
CCK78963.1
Capsular polysacchararide biosynthesis protein CapD, fragment.
  
 0.817
CCK81830.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.817
capD2
CapD2: UDP-glucose 4-epimerase.
  
 0.784
CCK80473.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.775
CCK78973.1
Polysaccharide biosynthesis protein.
 
  
 0.747
capF
CapF: capsular polysaccharide synthesis enzyme.
  
  
 0.725
CCK78977.1
Methyltransferase, type 11.
     
 0.724
capD
CapD: UDP-glucose 4-epimerase.
 
  
 0.713
wecB
WecB: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.637
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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