STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK78978.1Glycosyl transferase, family 2. (352 aa)    
Predicted Functional Partners:
CCK78975.1
Putative sugar transferase; Signal anchor.
   
 0.806
capF
CapF: capsular polysaccharide synthesis enzyme.
  
  
 0.762
CCK80014.1
Tetratricopeptide (TRP1+2) repeat protein; Signal peptide.
  
 
 0.688
CCK80044.1
TRP-repeat-containing protein with CheY-like response regulator receiver domain.
  
 
 0.672
CCK79243.1
Tetratricopeptide repeat protein.
  
 
 0.648
CCK80475.1
Predicted polysaccharide deacetylase.
 
  
 0.638
CCK80471.1
Predicted polysaccharide deacetylase.
 
  
 0.632
CCK81830.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
   
 0.631
wecB
WecB: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
     
 0.622
CCK80485.1
Polysaccharide deacetylase.
  
  
 0.616
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.