Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK78993.1Conserved uncharacterized protein. (321 aa)    
Predicted Functional Partners:
CCK78994.1
Predicted lysozyme.
       0.615
CCK78995.1
Uncharacterized protein.
      
0.489
CCK78996.1
Uncharacterized protein.
       0.489
capD2
CapD2: UDP-glucose 4-epimerase.
       0.468
CCK78992.1
Uncharacterized putative membrane protein.
       0.468
CCK79836.1
Conserved uncharacterized protein.
  
     0.445
CCK79837.1
Conserved uncharacterized protein.
  
     0.437
CCK82006.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
     0.431
CCK80222.1
Predicted antitoxin of toxin-antitoxin stability system; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.415
CCK79841.1
Uncharacterized protein.
  
     0.414
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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