Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK79049.1Uncharacterized protein related to methyltransferase type 11. (277 aa)    
Predicted Functional Partners:
CCK79050.1
Extracellular solute-binding protein, family 1; Signal peptide.
       0.773
CCK79048.1
Choline/ethanolamine kinase.
       0.723
CCK79047.1
Uncharacterized protein related to glutamyl tRNA-reductase.
       0.625
CCK81323.1
Methyltransferase, type 11.
  
     0.585
CCK79046.1
Phosphoesterase family protein; Signal peptide.
       0.583
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
   
 
 0.463
CCK81829.1
Amino acid adenylation domain protein.
     
 0.438
CCK79051.1
VanZ family protein.
       0.412
ispA
IspA: geranyltranstransferase (Farnesyl-diphosphate synthase); Belongs to the FPP/GGPP synthase family.
  
 
 0.406
ispB
IspB: octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.406
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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