Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK79083.1Transcriptional regulator, MarR family. (153 aa)    
Predicted Functional Partners:
CCK79082.1
Efflux transporter, RND family, MFP subunit precursor; Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.785
CCK79081.1
Predicted efflux transporter, AcrB/AcrD/AcrF family, permease; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.713
CCK81789.1
Predicted polyketide synthase.
  
  
 0.562
CCK80958.1
Conserved uncharacterized protein.
  
     0.540
CCK79222.1
Fe-S cluster protein, related to acetyl-CoA synthase.
  
     0.537
CCK79086.1
Putative transcriptional regulator, AraC family.
 
  
 0.448
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.447
CCK79084.1
Predicted ABC transporter solute-binding protein; Signal peptide.
     
 0.422
CCK79863.1
Conserved uncharacterized protein.
  
     0.418
CCK81309.1
Putative CO dehydrogenase/acetyl-CoA synthase (corrinoid Fe-S protein).
  
     0.414
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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