Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79106.1Putative ABC transporter substrate-binding protein; Signal peptide. (350 aa)    
Predicted Functional Partners:
CCK79107.1
Two component system response regulator.
       0.776
CCK79105.1
Two component system sensor histidine kinase.
       0.773
CCK79713.1
ABC transporter, substrate-binding protein; Signal peptide.
  
     0.773
yqiK
YqiK: predicted inner membrane protein; Signal peptide.
       0.553
yqiJ
YqiJ: putative inner membrane protein; Signal peptide.
       0.467
CCK79110.1
Suppressor of sigma54-dependent transcription.
       0.467
CCK79773.1
Putative sensory protein; Signal peptide.
 
    0.463
CCK79104.1
Metallophosphoesterase, precursor; Signal peptide.
       0.429
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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