Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yqiJYqiJ: putative inner membrane protein; Signal peptide. (240 aa)    
Predicted Functional Partners:
CCK79110.1
Suppressor of sigma54-dependent transcription.
 
  
 0.974
yqiK
YqiK: predicted inner membrane protein; Signal peptide.
 
  
 0.953
CCK82479.1
Conserved uncharacterized protein, UPF0365; Signal anchor.
   
  
 0.548
CCK80691.1
WD-40 repeat domain protein.
  
     0.533
pspA
PspA: phage shock protein A.
  
  
 0.532
CCK80692.1
WD-40 repeat domain protein.
  
     0.518
CCK82480.1
Conserved uncharacterized protein, related to nfeD; Signal anchor.
  
    0.502
CCK79105.1
Two component system sensor histidine kinase.
       0.467
CCK79106.1
Putative ABC transporter substrate-binding protein; Signal peptide.
       0.467
CCK79107.1
Two component system response regulator.
       0.467
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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