Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79111.1Conserved uncharacterized protein; Signal peptide. (153 aa)    
Predicted Functional Partners:
cbiN
CbiN: putative cobalamin biosynthesis protein.
 
  
  0.925
CCK81014.1
Conserved uncharacterized protein; Signal peptide.
  
  
 
0.922
CCK79112.1
Putative ABC-type Co2+ transport system periplasmic component-like protein; Signal peptide.
 
     0.881
CCK78387.1
Conserved uncharacterized protein; Signal peptide.
 
     0.754
CCK81458.1
Conserved uncharacterized protein; Signal peptide.
 
     0.686
CCK81015.1
Conserved uncharacterized protein; Signal peptide.
 
     0.667
CCK79113.1
TonB-dependent receptor; Signal peptide.
 
     0.557
CCK79841.1
Uncharacterized protein.
  
     0.467
cbiM
CbiM: cobalamin biosynthesis protein; Signal peptide.
 
   
 0.464
CCK79837.1
Conserved uncharacterized protein.
  
     0.463
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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