Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79122.1Conserved uncharacterized protein; Signal anchor. (238 aa)    
Predicted Functional Partners:
CCK79123.1
Conserved uncharacterized protein; Signal anchor.
       0.796
CCK79121.1
Predicted iron ABC transporter, ATP-binding protein.
       0.773
CCK79119.1
Predicted iron ABC transporter, substrate-binding protein, precursor; Signal peptide.
       0.544
CCK79120.1
Predicted iron ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.525
CCK79124.1
Conserved uncharacterized protein.
       0.402
CCK79125.1
CRISPR-associated helicase, Cas3 family.
       0.402
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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