Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79141.1Predicted outer membrane protein, OmpA/MotB domain; Signal peptide. (408 aa)    
Predicted Functional Partners:
CCK80688.1
AmpA/MotB domain protein; Signal peptide.
  
     0.713
flgC
FlgC: flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.647
tolB
TolB: tol-pal system, periplasmic component; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.596
fliF
FliF: flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.554
skp
Skp: predicted outer membrane chaperone; Signal peptide.
  
 
 0.526
flgE
FlgE: flagellar hook protein.
   
 
 0.510
osmY
OsmY: predicted osmotically-inducible protein Y; Signal peptide.
 
  
 0.506
CCK81899.1
Conserved uncharacterized protein; Signal peptide.
  
 
 0.481
lolA
LolA: predicted outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 0.474
flgH
FlgH: flagellar L-ring protein (basal body L-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
 
 0.459
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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