Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oadBOadB: oxaloacetate decarboxylase, beta chain. (375 aa)    
Predicted Functional Partners:
pycB
PycB: pyruvate carboxylase, subunit B.
 
 
 0.998
CCK81979.1
Carboxyl transferase.
 
 
 0.937
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
 
  
 0.930
sfcA
SfcA: NAD-dependent malic enzyme.
    
 0.913
mdh3
Mdh3: predicted malate dehydrogenase.
    
 0.913
korA3
KorA3: 2-oxoglutarate synthase, alpha subunit.
    
 0.912
pyc
Pyc: pyruvate carboxylase.
    
  0.911
pyk
Pyk: pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.908
korB2
KorB2: 2-oxoglutarate synthase, subunit B.
    
 0.907
ppsA2
PpsA2: phosphoenolpyruvate synthase/pyruvate phosphate dikinase (PEP synthase).
    
 0.905
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.