Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79223.1NADH:flavn oxidoreductase/NADH oxidase. (370 aa)    
Predicted Functional Partners:
carD
CarD: transcriptional regulator, CarD family.
   
    0.469
CCK79224.1
Predicted CoA-binding protein.
       0.437
etfB1
EtfB1: electron transfer flavoprotein, beta-subunit.
  
 
 0.411
bamO
BamO: electron transfer flavoprotein, beta subunit.
  
 
 0.411
etfB2
EtfB2: electron transfer flavoprotein, beta subunit.
  
 
 0.411
etfB3
EtfB3: electron transfer flavoprotein, beta subunit.
  
 
 0.411
etfB4
EtfB4: electron transfer flavoprotein, beta subunit.
  
 
 0.411
tuf
Tuf: elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.405
tuf2
Tuf2: translation elongation factor EF-Tu.
   
  
 0.405
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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