STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79246.1RND efflux system, outer membrane lipoprotein, NodT family; Signal peptide. (464 aa)    
Predicted Functional Partners:
ttgH
TtgH: toluene efflux pump membrane transporter.
 
 0.949
CCK79247.1
RND efflux system, membrane fusion protein (MFP); Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.932
ttgG
TtgG: toluene efflux pump periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.868
mdtB
MdtB: multidrug resistance protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.851
CCK78700.1
Efflux transporter, RND family, MFP subunit.
 
 
 0.849
CCK80347.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.837
CCK78573.1
Predicted efflux transporter, RND family, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.750
mdtA
MdtA: predicted multidrug resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.723
mtdA2
MdtA2: predicted multidrug resistance protein A; Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.701
prtE
PrtE: proteases secretion protein E.
  
 
 0.684
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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