Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79246.1RND efflux system, outer membrane lipoprotein, NodT family; Signal peptide. (464 aa)    
Predicted Functional Partners:
ttgH
TtgH: toluene efflux pump membrane transporter.
 
 0.941
CCK79247.1
RND efflux system, membrane fusion protein (MFP); Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.922
ttgG
TtgG: toluene efflux pump periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.843
mdtB
MdtB: multidrug resistance protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.827
CCK80347.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.813
CCK78700.1
Efflux transporter, RND family, MFP subunit.
 
 
 0.790
CCK78573.1
Predicted efflux transporter, RND family, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.713
mdtA
MdtA: predicted multidrug resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.682
mtdA2
MdtA2: predicted multidrug resistance protein A; Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.611
prtE
PrtE: proteases secretion protein E.
  
 
 0.584
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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