Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79249.1Uncharacterized acetyltransferase, GNAT family, with CoA-binding site. (810 aa)    
Predicted Functional Partners:
CCK79891.1
Conserved uncharacterized protein, related to acetyl-CoA synthetase.
 
    
0.871
CCK79247.1
RND efflux system, membrane fusion protein (MFP); Signal peptide; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.764
mdtB
MdtB: multidrug resistance protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.746
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.592
CCK81789.1
Predicted polyketide synthase.
  
  
 0.591
rnc
Rnc: ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.587
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
  
 0.551
pyrF
PyrF: orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
    0.545
CCK79246.1
RND efflux system, outer membrane lipoprotein, NodT family; Signal peptide.
       0.514
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
  
 
 0.455
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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