Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lysCLysC: aspartokinase (aspartate kinase); Belongs to the aspartokinase family. (407 aa)    
Predicted Functional Partners:
hom
Hom: homoserine dehydrogenase.
 
 0.989
asd
Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.982
lysA3
LysA3: diaminopimelate decarboxylase.
 
  
 0.918
CCK79252.1
Conserved uncharacterized protein, UPF0079.
      0.899
argG
ArgG: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.888
asnB
AsnB: asparagine synthetase.
  
 
 0.885
aspC
AspC: predicted aspartate aminotransferase.
  
 0.846
purA
PurA: adenylosuccinate lyase, subunit A; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.841
ansB
AnsB: L-asparaginase.
     
 0.824
CCK79152.1
Putative L-asparaginase.
     
 0.823
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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