Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79256.1Two component transcriptional regulator, sigma54-specific. (472 aa)    
Predicted Functional Partners:
CCK79255.1
Two component system sensor histidine kinase, hybrid.
 
 
 0.860
rpoN
RpoN: RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.559
CCK78687.1
Two component system sensor protein.
 
 
 0.439
fliM
FliM: flagellar motor switch protein.
  
  
 0.439
cheW
CheW: chemotaxis protein CheW.
  
  
 0.433
fliP
FliP: flagellar biosynthesis protein, protein export component; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.423
tag
Tag: DNA-3-methyladenine glycosylase I.
       0.422
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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