Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fadFFadF: predicted uncharacterized protein fadF. (687 aa)    
Predicted Functional Partners:
etfB3
EtfB3: electron transfer flavoprotein, beta subunit.
  
 0.740
etfA3
EtfA3: electron transfer flavoprotein, alpha subunit.
 
  
 0.738
fadB
FadB: 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
  
 0.616
fadR
FadR: transcriptional regulator, TetR family.
 
   
 0.569
CCK78218.1
Conserved uncharacterized protein.
  
 
 0.506
CCK80581.1
Predicted coenzyme F420 hydrogenase/dehydrogenase, beta subunit.
  
 
 0.506
CCK79458.1
Conserved uncharacterized protein; Signal peptide.
  
 
 0.455
putA
PutA: proline dehydrogenase.
  
   
 0.401
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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