Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rfaGRfaG: putative lipopolysaccharide cor biosynthesis protein. (369 aa)    
Predicted Functional Partners:
CCK79415.1
Uncharacterized glycosyl transferase I.
     0.831
CCK81686.1
dTDP-glucose 4,6-hedydratase.
 
  
 0.806
CCK78989.1
NAD-dependent epimerase/dehydratase.
 
  
 0.686
CCK79416.1
Uncharacterized protein, kinase-like domain.
  
 
 0.673
CCK79420.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.652
kdsB
KdsB: 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
     
 0.636
CCK79576.1
Putative glycosyl transferase, family 1.
  
   
 0.632
CCK81830.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.623
CCK80642.1
Amylo-alpha-1,6-glucosidase.
  
 
 0.618
adh
Adh: iron-containing alcohol dehydrogenase.
       0.607
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.