Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79473.1Predicted methyltranferase, type 12. (362 aa)    
Predicted Functional Partners:
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
 
 0.914
rpsE
RpsE: 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 0.903
rplD
RplD: 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
    
 0.802
CCK78201.1
Conserved uncharacterized protein related to NAD-dependent epimerase/dehydratase.
  
 0.799
rpsO
RpsO: 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
  0.744
CCK81789.1
Predicted polyketide synthase.
  
 0.725
adk
Adk: adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
   0.667
CCK80691.1
WD-40 repeat domain protein.
  
 0.661
CCK80692.1
WD-40 repeat domain protein.
  
 0.661
tmcD
TmcD: predicted Tmc redox complex, uncharacterized protein.
  
 0.658
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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