Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79502.1Conserved uncharacterized protein, UPF0153. (146 aa)    
Predicted Functional Partners:
recR
RecR: recombination protein R; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
    0.833
CCK79504.1
Conserved uncharacterized protein, UPF0149; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.824
dnaX
DnaX: DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.793
CCK78744.1
Conserved uncharacterized protein, UPF0153.
  
     0.767
CCK81282.1
Conserved uncharacterized protein.
  
     0.504
CCK80454.1
Conserved uncharacterized protein.
  
     0.481
CCK82264.1
Conserved uncharacterized protein, UPF0153.
  
     0.466
CCK79506.1
Putative RNA methylase; Belongs to the methyltransferase superfamily.
       0.463
CCK79507.1
Conserved uncharacterized protein.
       0.445
CCK81155.1
Predicted peptidase M48, Ste24p.
 
     0.445
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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