Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK79507.1Conserved uncharacterized protein. (112 aa)    
Predicted Functional Partners:
CCK79506.1
Putative RNA methylase; Belongs to the methyltransferase superfamily.
       0.796
glmS
GlmS: glucosamine--fructose-6-phosphate aminotransferase.
  
     0.704
CCK79216.1
Conserved uncharacterized protein.
  
     0.687
CCK80280.1
Conserved uncharacterized protein.
  
     0.567
CCK81550.1
Conserved uncharacterized protein; Signal anchor.
  
     0.567
CCK80384.1
GHMP kinase.
  
     0.564
CCK80424.1
Conserved uncharacterized protein; Signal peptide.
  
     0.533
dnaX
DnaX: DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
       0.507
hflC
HflC: membranecomplex HflKC protein C; HflC and HflK could regulate a protease.
       0.501
hflK
HflK: membranecomplex HflKC protein K; HflC and HflK could encode or regulate a protease.
       0.500
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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