Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pilDPilD: type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (266 aa)    
Predicted Functional Partners:
pilC
PilC: type 4 fimbrial assembly protein.
 
  
 0.883
gspF-2
GspF: general secretion pathway protein F.
 
  
 0.882
gspF
GspF: predicted general secretion pathway protein F.
 
  
 0.878
gspE-2
GspE: general secretion pathway protein E.
 
 
 0.852
pilB
PilB: type IV pilus asse,nly protein.
 
 
 0.852
gspE
GspE: putative general secretion pathway protein E.
 
 
 0.850
gspE2
GspE2: general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.848
pilT
PilT: twitching motility protein.
 
   
 0.797
pilM
PilM: type IV pilus assembly protein.
 
  
 0.794
pilT2
PilT2: twitching motility protein.
 
   
 0.780
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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