Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gspKGspK: type II secretoy pathway component PulK-like protein. (376 aa)    
Predicted Functional Partners:
gspG
GspG: general secretion pathway protein G; Signal anchor.
 
 
 0.981
CCK79544.1
Conserved uncharacterized protein, prepilin domain; Signal anchor.
  
 
 0.950
gspD
GspD: general secretion pathway protein D; Signal peptide.
 
  
 0.896
CCK79551.1
Putative general secrestion pathway protein C.
 
  
 0.892
CCK79548.1
Putative general secrestion pathway protein L.
 
  
 0.884
CCK79555.1
Uncharacterized protein; Signal peptide.
 
     0.797
CCK79545.1
Conserved uncharacterized protein.
       0.790
CCK78875.1
Uncharacterized protein; Signal peptide.
 
 
 0.779
CCK79546.1
Uncharacterized protein; Signal peptide.
     
 0.752
CCK78877.1
Uncharacterized protein containing N-terminal methylation motif.
  
 
 0.750
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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