Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gspGGspG: general secretion pathway protein G; Signal anchor. (148 aa)    
Predicted Functional Partners:
gspK
GspK: type II secretoy pathway component PulK-like protein.
 
 
 0.981
gspD
GspD: general secretion pathway protein D; Signal peptide.
  
 0.937
gspE2
GspE2: general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.895
gspF-2
GspF: general secretion pathway protein F.
 
  
 0.880
CCK79551.1
Putative general secrestion pathway protein C.
 
  
 0.827
gspE-2
GspE: general secretion pathway protein E.
 
 
 0.807
gspE
GspE: putative general secretion pathway protein E.
 
 
 0.805
CCK79546.1
Uncharacterized protein; Signal peptide.
  
  
 0.767
gspF
GspF: predicted general secretion pathway protein F.
 
  
 0.765
pilB
PilB: type IV pilus asse,nly protein.
 
 
 0.756
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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