Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
prtEPrtE: proteases secretion protein E. (436 aa)    
Predicted Functional Partners:
CCK79565.1
Predicted type I secretion system ATPase.
  
 0.964
prtD2
PrtD2: proteases secretion ATP-binding protein.
  
 0.958
prtD
PrtD: proteases secretion ATP-binding protein.
  
 0.951
CCK78804.1
Putative multidrug export ATP-binding/permease protein.
  
 
 0.943
CCK79562.1
Outer membrane efflux protein; Signal peptide.
 
 
 0.860
wbpZ
WbpZ: glycosyl transferase, family I.
 
  
 0.822
CCK80813.1
Putative calcium-binding hemolysin protein.
 
  
 0.761
CCK80150.1
Outer membrane efflux protein, TolC-like; Signal peptide.
 
 
 0.689
ctaC
CtaC: predicted cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
   
 0.684
CCK80811.1
Putative hemolysin-type lysine-binding protein.
 
  
 0.684
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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