Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wbpZWbpZ: glycosyl transferase, family I. (370 aa)    
Predicted Functional Partners:
CCK79573.1
Glycosyltransferase, family I.
     0.860
CCK79565.1
Predicted type I secretion system ATPase.
 
     0.841
prtE
PrtE: proteases secretion protein E.
 
  
 0.822
prtD2
PrtD2: proteases secretion ATP-binding protein.
 
     0.780
prtD
PrtD: proteases secretion ATP-binding protein.
 
     0.778
CCK79579.1
Glycosyl transferase, family 1.
  
     0.749
CCK79574.1
ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export.
 
 0.665
CCK79572.1
Putative ABC transporter (type 2), peramease protein, putative function in lipopolysaccharide export.
 
  
 0.628
CCK80642.1
Amylo-alpha-1,6-glucosidase.
  
 
 0.618
CCK80307.1
Predicted O-antigen export system ATP-binding protein.
 
 0.605
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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