Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79569.1Conserved uncharacterized protein; Signal peptide. (451 aa)    
Predicted Functional Partners:
livM
LivM: high-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.681
livM2
LivM2: branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.681
livM3
LivM3: high-affinity branched-chain amino acid transport system, permease protein; Signal peptide; Belongs to the binding-protein-dependent transport system permease family.
   
   0.681
CCK78246.1
Conserved uncharacterized protein.
  
    0.565
CCK79580.1
Uncharacterized protein.
  
    0.565
CCK80458.1
Uncharacterized protein; Signal peptide.
  
    0.565
CCK80945.1
Putative Large exoprotein containing haemagglutination activity domain; Signal peptide.
  
    0.565
CCK80949.1
Filamentous harmagglutinin family outer membrane protein.
  
    0.565
CCK79568.1
Uncharacterized protein.
       0.552
gca
Gca: GDP-mannose 4,6-dehydratase.
     
 0.518
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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