Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79572.1Putative ABC transporter (type 2), peramease protein, putative function in lipopolysaccharide export. (258 aa)    
Predicted Functional Partners:
CCK79574.1
ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export.
 
 0.997
CCK80307.1
Predicted O-antigen export system ATP-binding protein.
 
 0.995
CCK80308.1
Predicted O-antigen export system, permease protein.
  
  
 
0.929
CCK80314.1
Predicted O-antigen export system, permease protein; Signal anchor.
  
  
 
0.926
CCK79575.1
Predicted methyltransferase, type 11.
 
   
 0.868
CCK79573.1
Glycosyltransferase, family I.
 
  
 0.815
gmd
Gmd: GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.809
gca
Gca: GDP-mannose 4,6-dehydratase.
 
  
 0.762
CCK80301.1
Predicted glycosyl transferase, family 2.
 
  
 0.684
CCK79576.1
Putative glycosyl transferase, family 1.
 
  
 0.679
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: medium (42%) [HD]