STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79574.1ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export. (401 aa)    
Predicted Functional Partners:
CCK79572.1
Putative ABC transporter (type 2), peramease protein, putative function in lipopolysaccharide export.
 
 0.997
CCK80308.1
Predicted O-antigen export system, permease protein.
 
 0.995
CCK80314.1
Predicted O-antigen export system, permease protein; Signal anchor.
 
 0.995
CCK79575.1
Predicted methyltransferase, type 11.
 
   
 0.945
CCK79573.1
Glycosyltransferase, family I.
 
 0.930
CCK80307.1
Predicted O-antigen export system ATP-binding protein.
  
  
 
0.919
CCK79576.1
Putative glycosyl transferase, family 1.
 
 
 0.880
wbpZ
WbpZ: glycosyl transferase, family I.
 
 0.650
CCK79579.1
Glycosyl transferase, family 1.
 
 
 0.635
manC
ManC: mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.629
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.