STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79579.1Glycosyl transferase, family 1. (1120 aa)    
Predicted Functional Partners:
CCK79575.1
Predicted methyltransferase, type 11.
 
     0.805
wbpZ
WbpZ: glycosyl transferase, family I.
  
     0.749
CCK79572.1
Putative ABC transporter (type 2), peramease protein, putative function in lipopolysaccharide export.
 
  
 0.655
capF
CapF: capsular polysaccharide synthesis enzyme.
  
  
 0.640
CCK79574.1
ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export.
 
 
 0.635
CCK79590.1
Putative peptidase, M12A family; Signal peptide.
  
     0.610
CCK81686.1
dTDP-glucose 4,6-hedydratase.
 
  
 0.582
CCK81696.1
GCN5-related N-acetyltransferase.
  
   
 0.538
CCK79578.1
Predicted methyltransferase, type 11.
       0.537
CCK80314.1
Predicted O-antigen export system, permease protein; Signal anchor.
 
  
 0.533
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.