Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acsA3AcsA3: acetyl-CoA synthetase. (588 aa)    
Predicted Functional Partners:
CCK81789.1
Predicted polyketide synthase.
  
 
 0.595
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.592
CCK78919.1
GCN5-related N-acetyltransferase.
  
 
 0.523
nifJ
NifJ: pyruvate-flavodoxin oxidoreductase.
  
 
 0.522
CCK79635.1
Leu/Ile/Val-binding protein; Signal peptide.
     
 0.485
prpB
PrpB: predicted methylisocitrate lyase.
  
  
 0.463
CCK79135.1
MmgE/PrpD family protein.
 
  
 0.462
cbiM
CbiM: cobalamin biosynthesis protein; Signal peptide.
     
 0.440
fumB
FumB: fumarate hydratase class I (fumarase); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.436
fumB2
FumB2: fumarate hydratase class I (fumarase); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.436
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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